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Molecules and Medicine (E. J. Corey, Barbara Czakó, and László Kürti) Robert E. Buntrock Looking for a book on common drugs and pharmaceuticals? On diseases and medical conditions? On pharmacology? In addition, do you need some background in chemistry to handle all of this information? If you want all of this, and in addition want it under one cover, then this is the book for you. Buntrock, Robert E. J. Chem. Educ. 2008, 85, 1495.
Bioorganic Chemistry |
Drugs / Pharmaceuticals |
Molecular Properties / Structure |
Proteins / Peptides |
Synthesis |
Toxicology
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OMLeT—An Alternative Approach to Learning Metabolism: Glycolysis and the TCA Cycle as an Example Charles M. Stevens, Dylan M. Silver, Brad Behm, Raymond J. Turner, and Michael G. Surette Using PHP Hypertext Preprocessor scripting, the dynamic OMLeT (Online Metabolism Learning Tool) Web site is geared towards different learning styles and allows the student to process metabolic pathways (glycolysis and TCA cycle) via a user-defined approach. Stevens, Charles M.; Silver, Dylan M.; Behm, Brad; Turner, Raymond J.; Surette, Michael G. J. Chem. Educ. 2007, 84, 2024.
Bioenergetics |
Enzymes |
Learning Theories |
Metabolism |
Proteins / Peptides
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A New Colorimetric Assay of Tabletop Sweeteners Using a Modified Biuret Reagent Christopher J. Fenk, Nathan Kaufman, and Donald G. Gerbig, Jr. Presents a new, fast and effective colorimetric analysis of aspartame that incorporates a less caustic biuret reagent and visible spectroscopic analysis for selective detection in aqueous solutions using readily available instrumentation. Fenk, Christopher J.; Kaufman, Nathan; Gerbig, Donald G., Jr. J. Chem. Educ. 2007, 84, 1676.
Consumer Chemistry |
Coordination Compounds |
Crystal Field / Ligand Field Theory |
Food Science |
Qualitative Analysis |
Quantitative Analysis |
UV-Vis Spectroscopy |
Amino Acids
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Nature's Way To Make the Lantibiotics Heather A. Relyea and Wilfred A. van der Donk This article focuses on one class of antimicrobial compounds, the lantibiotics, and discusses their biosynthetic pathways as well as their molecular mode of action. In the course of the review, the meaning of the terms regio-, chemo-, and stereoselectivity are discussed. Relyea, Heather A.; van der Donk, Wilfred A. J. Chem. Educ. 2006, 83, 1769.
Applications of Chemistry |
Bioorganic Chemistry |
Biotechnology |
Biosynthesis |
Catalysis |
Drugs / Pharmaceuticals |
Proteins / Peptides
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Amino Acids William F. Coleman The Featured Molecules this month are the 20 standard alpha-amino acids found in proteins. The molecules are presented in two formats, the neutral form and the ionized form found in solution at physiologic pH. Coleman, William F. J. Chem. Educ. 2006, 83, 1103.
Amino Acids |
Proteins / Peptides |
Molecular Properties / Structure |
Molecular Modeling |
Molecular Mechanics / Dynamics
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Glycosyltransferases A and B: Four Critical Amino Acids Determine Blood Type Natisha L. Rose, Monica M. Palcic, and Stephen V. Evans Human A, B, and O blood type is determined by the presence or absence of distinct carbohydrate structures on red blood cells. In this review the chemistry of the blood group ABO system and the role of glycosyltransferase A, glycosyltransferase B, and the four amino acids critical to determining blood group status are discussed. Rose, Natisha L.; Palcic, Monica M.; Evans, Stephen V. J. Chem. Educ. 2005, 82, 1846.
Carbohydrates |
Enzymes |
Kinetics |
Bioorganic Chemistry |
Crystals / Crystallography |
Molecular Biology |
X-ray Crystallography |
Amino Acids
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Cotton Effect in Copper–Proline Complexes in the Visible Region Victor Volkov and Rolf Pfister This article suggests taking advantage of the visible dd electronic transition of Cu2+, which allows one to contrast the normal optical rotatory dispersion response of d- and l-proline in aqueous solution with the strong Cotton effect observed when these amino acids are complexed with a metal cation. Volkov, Victor; Pfister, Rolf. J. Chem. Educ. 2005, 82, 1663.
Chirality / Optical Activity |
IR Spectroscopy |
Molecular Properties / Structure |
Spectroscopy |
Stereochemistry |
UV-Vis Spectroscopy |
Amino Acids |
Coordination Compounds |
Crystal Field / Ligand Field Theory
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A Green Polymerization of Aspartic Acid for the Undergraduate Organic Laboratory George D. Bennett Based on a technology that won a Presidential Green Chemistry Challenge Award, this experiment involves the thermal polymerization of aspartic acid and subsequent hydrolysis to give sodium poly(aspartate). The procedure is suitable for introducing students to the important topic of polymers and for illustrating several of the principles of green chemistry. Bennett, George D. J. Chem. Educ. 2005, 82, 1380.
Green Chemistry |
Synthesis |
Industrial Chemistry |
Natural Products |
Polymerization |
Proteins / Peptides
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A Supramolecular Approach to Medicinal Chemistry: Medicine Beyond the Molecule David K. Smith This article emphasizes a conceptual view of medicinal chemistry, which has important implications for the future, as the supramolecular approach to medicinal-chemistry products outlined here is rapidly allowing nanotechnology to converge with medicine. In particular, this article discusses recent developments including the rational design of drugs such as Relenza and Tamiflu, the mode of action of vancomycin, and the mechanism by which bacteria develop resistance, drug delivery using cyclodextrins, and the importance of supramolecular chemistry in understanding protein aggregation diseases such as Alzheimer's and CreutzfieldJacob. Smith, David K. J. Chem. Educ. 2005, 82, 393.
Drugs / Pharmaceuticals |
Noncovalent Interactions |
Medicinal Chemistry |
Nanotechnology |
Proteins / Peptides
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Chemical Modification of Papain and Subtilisin: An Active Site Comparison. An Undergraduate Biochemistry Experiment Mireille St-Vincent and Michael Dickman This experiment demonstrates the specific chemistry of cysteine and serine residues in the active sites of papain and subtilisin. St-Vincent, Mireille; Dickman, Michael. J. Chem. Educ. 2004, 81, 1048.
Amino Acids |
Bioorganic Chemistry |
Enzymes
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The Monosodium Glutamate Story: The Commercial Production of MSG and Other Amino Acids Addison Ault Examples of the industrial synthesis of pure amino acids are presented. The emphasis is on the synthesis of (S)-glutamic acid and, to a lesser extent, (S)-lysine and (R,S)-methionine. These amino acids account for about 90% of the total world production of amino acids. Ault, Addison. J. Chem. Educ. 2004, 81, 347.
Amino Acids |
Biotechnology |
Chirality / Optical Activity |
Consumer Chemistry |
Enzymes |
Natural Products |
Stereochemistry |
Synthesis |
Food Science
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LC–MS of Metmyoglobin at pH = 2. Separation and Characterization of Apomyoglobin and Heme by ESI–MS and UV–Vis Helen Cleary Stynes, Araceli Layo, and Richard W. Smith This article describes an experiment employing LCMS where metmyoglobin is denatured to apomyoglobin and heme in a mobile phase gradient of acetonitrile H2O with 0.1% trifluoroacetic acid. The apomyoglobin is separated from the heme group by reversed-phase chromatography. Stynes, Helen Cleary; Layo, Araceli; Smith, Richard W. J. Chem. Educ. 2004, 81, 266.
Biotechnology |
Chromatography |
Instrumental Methods |
Mass Spectrometry |
Proteins / Peptides |
UV-Vis Spectroscopy
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Food: The Chemistry of Its Components, 4th Edition (T. P. Coultrate) Richard Pagni The book begins with an extensive discussion of the major constituents of food: sugars and their polymers, lipids, and amino acids and their polymers. This is followed by fascinating chapters on colors and flavors, the ingredients that do so much to make food enjoyable. Pagni, Richard. J. Chem. Educ. 2004, 81, 39.
Consumer Chemistry |
Food Science |
Applications of Chemistry |
Carbohydrates |
Proteins / Peptides |
Lipids
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The pH at the First Equivalence Point in the Titration of a Diprotic Acid Addison Ault I read with interest the paper entitled Easy Derivation of pH (pKa1 + pKa2)/2 Using Autoprotolysis of HA: Doubtful Value of the Supposedly More Rigorous Equation. I believe the validity of this simple result can be seen even more easily than this paper indicates. Ault, Addison. J. Chem. Educ. 2003, 80, 1382.
Acids / Bases |
Equilibrium |
pH |
Titration / Volumetric Analysis
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Some Like It Cold: A Computer-Based Laboratory Introduction to Sequence and Tertiary Structure Comparison of Cold-Adapted Lactate Dehydrogenases Using Bioinformatics Tools M. Sue Lowery and Leigh A. Plesniak Students download sequences and structures from appropriate databases, create sequence alignments, and carry out molecular modeling exercises, and then form hypotheses about the mechanism of biochemical adaptation for function and stability. This laboratory is appropriate for biochemistry and molecular biology laboratory courses, special topics, and advanced biochemistry lecture courses, and can be adapted for honors high school programs. Lowery, M. Sue; Plesniak, Leigh A. J. Chem. Educ. 2003, 80, 1300.
Enzymes |
Molecular Modeling |
Proteins / Peptides |
Molecular Properties / Structure
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Protein Design Using Unnatural Amino Acids Basar Bilgiçer and Krishna Kumar Using examples from the literature, this article describes the available methods for unnatural amino acid incorporation and highlights some recent applications including the design of hyperstable protein folds. Bilgiçer, Basar; Kumar, Krishna. J. Chem. Educ. 2003, 80, 1275.
Amino Acids |
Bioorganic Chemistry |
Biotechnology |
Proteins / Peptides |
Synthesis |
Molecular Properties / Structure
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Entropy Loss of Hydroxyl Groups of Balanol upon Binding to Protein Kinase A Gergely Gidofalvi, Chung F. Wong, and J. Andrew McCammon Summer project to give undergraduates hands-on experience in using several modern tools of molecular modeling for computer-aided drug design. Gidofalvi, Gergely; Wong, Chung F.; McCammon, J. Andrew. J. Chem. Educ. 2002, 79, 1122.
Computational Chemistry |
Drugs / Pharmaceuticals |
Medicinal Chemistry |
Molecular Recognition |
Undergraduate Research |
Molecular Modeling |
Statistical Mechanics |
Thermodynamics |
Proteins / Peptides
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Easy Derivation... (re J. Chem. Educ. 2000, 77, 1183) Stephen J. Hawkes Analysis of pH derivation by averaging pK values. Hawkes, Stephen J. J. Chem. Educ. 2002, 79, 162.
Acids / Bases |
Equilibrium |
pH
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Easy Derivation... (re J. Chem. Educ. 2000, 77, 1183) Julian L. Roberts Jr. Analysis of pH derivation by averaging pK values. Roberts, Julian L., Jr. J. Chem. Educ. 2002, 79, 161.
Acids / Bases |
Equilibrium |
pH
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Thin-Layer Electrophoresis Tom Lyons Fisher, Tara Leslie Fitzsimmons, and I. David Reingold Thin-layer electrophoresis apparatus. Fisher, Tom Lyons; Fitzsimmons, Tara Leslie; Reingold, I. David. J. Chem. Educ. 2001, 78, 1241.
Amino Acids |
Electrophoresis |
Laboratory Equipment / Apparatus |
Separation Science
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Blood-Chemistry Tutorials: Teaching Biological Applications of General Chemistry Material Rachel E. Casiday, Dewey Holten, Richard Krathen, and Regina F. Frey Four, Web-based tutorials that deal with chemical processes in the blood and provide an integrated biological context for a variety of chemical concepts. Casiday, Rachel E.; Holten, Dewey; Krathen, Richard; Frey, Regina F. J. Chem. Educ. 2001, 78, 1210.
Applications of Chemistry |
Medicinal Chemistry |
Proteins / Peptides |
Acids / Bases |
Equilibrium |
Molecular Properties / Structure
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Protein Structure Wordsearch Terry L. Helser Puzzle with 37 names, terms, prefixes, and acronyms that describe protein structure. Helser, Terry L. J. Chem. Educ. 2001, 78, 474.
Proteins / Peptides |
Nomenclature / Units / Symbols |
Molecular Properties / Structure
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Chromatin Isolation and DNA Sequence Analysis in Large Undergraduate Laboratory Sections Ann E. Hagerman One exercise is a simple laboratory experiment in which chromatin is isolated from chicken liver and is resolved into histone proteins and DNA by ion-exchange chromatography. The other is a series of computer simulations that introduce DNA sequencing, mapping, and sequence analysis to the students. Hagerman, Ann E. J. Chem. Educ. 1999, 76, 1426.
Biotechnology |
Proteins / Peptides |
Nucleic Acids / DNA / RNA
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Do pH in Your Head Addison Ault Every aqueous solution has a pH. Two factors determine this pH: the acidic or basic strength of the solute, and its concentration. When you use pKa values to express acidic and basic strength you can easily estimate the approximate pH of many aqueous solutions of acids, bases, and their salts and their buffers. Ault, Addison. J. Chem. Educ. 1999, 76, 936.
Equilibrium |
Acids / Bases |
Aqueous Solution Chemistry |
Learning Theories |
Chemometrics |
Brønsted-Lowry Acids / Bases
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Amino Acid Wordsearch Terry L. Helser This is a short puzzle with all 20 genetically encoded amino acids embedded in the matrix. The unused letters form a sentence describing them. Helser, Terry L. J. Chem. Educ. 1999, 76, 494.
Amino Acids
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Using Copper sulfate as a Classification Test for Amino Acids and Amines Christine K. F. Hermann Using copper sulfate to test for amino acids and amines that do not dissolve well in water. Hermann, Christine K. F. J. Chem. Educ. 1995, 72, 940.
Amino Acids |
Laboratory Management |
Amines / Ammonium Compounds |
Qualitative Analysis
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A Ligand-Binding Study Based on a Protein Assay Method Chial, H. J.; Congdon, R. W.; Splittgerber, A. G. Experimental procedure for determining the protein concentration of an unknown solution, as well as the number of dye-binding sites on the protein; data and analysis included. Chial, H. J.; Congdon, R. W.; Splittgerber, A. G. J. Chem. Educ. 1995, 72, 76.
Proteins / Peptides |
Coordination Compounds |
Crystal Field / Ligand Field Theory
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Use of Tangle Links To Show Globular Protein Structure Marino, Francis Using Tangle Links (a child's toy) to model the primary, secondary, tertiary, and quaternary structure of proteins. Marino, Francis J. Chem. Educ. 1994, 71, 741.
Proteins / Peptides |
Molecular Modeling
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On the Formation of Peptide Bonds Stojanoski, Kiro; Zdravkovski, Zoran In an attempt to simplify the concept of peptide bond formation, many textbooks misrepresent the energy requirement that is necessary for peptide bonds to form. Stojanoski, Kiro; Zdravkovski, Zoran J. Chem. Educ. 1993, 70, 134.
Amino Acids |
Biosynthesis |
Equilibrium |
Bioenergetics
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Identification of amino acids in unknown dipeptides: A derivatization with 9-fluorenylmethyl chloroformate and HPLC Clapp, Charles H.; Swan, James S.; Poechmann, James L. This paper describes a biochemistry experiment in which students use HPLC to identify the amino acids in unknown dipeptides. Clapp, Charles H.; Swan, James S.; Poechmann, James L. J. Chem. Educ. 1992, 69, A122.
Amino Acids |
Proteins / Peptides |
HPLC
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Monitoring self-association of a hydrophobic peptide with high performance liquid chromatography: An undergraduate kinetic experiment using the antibiotic gramicidin A Braco, Lorenzo; Ba, M. Carmen; Abad, Concepcin The authors propose a kinetic experiment that uses high performance liquid chromatography to determine the rate and equilibrium constants in a very simple manner, and separate the molecular species under study. Braco, Lorenzo; Ba, M. Carmen; Abad, Concepcin J. Chem. Educ. 1992, 69, A113.
HPLC |
Kinetics |
Proteins / Peptides |
Rate Law |
Equilibrium
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Amino acid discovery Helser, Terry L. A biochemical quotation rebus puzzle. Helser, Terry L. J. Chem. Educ. 1992, 69, 970.
Amino Acids
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Inclass interactive worksheets for organic chemistry Ostercamp, Daryl L. The author has designed two in-class worksheets for use near the end of a two semester organic chemistry course, one dealing with mono- and disaccharides and the second dealing with alpha-amino acids and dipeptides. Ostercamp, Daryl L. J. Chem. Educ. 1992, 69, 318.
Carbohydrates |
Amino Acids |
Proteins / Peptides
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The malonic ester synthesis in the undergraduate laboratory Hoogenboom, Bernard E.; Ihrig, Phillip J.; Langsjoen, Arne N.; Linn, Carol J.; Mulder, Stephen D. The versatile reactions of diethyl malonate represent an important lecture topic in introductory organic courses, but are only rarely performed in the lab because of several problems associated with performing these reactions. These authors present a lab the circumvents some of the typical problems. Hoogenboom, Bernard E.; Ihrig, Phillip J.; Langsjoen, Arne N.; Linn, Carol J.; Mulder, Stephen D. J. Chem. Educ. 1991, 68, 689.
Aromatic Compounds |
Aldehydes / Ketones |
Amino Acids |
Heterocycles |
Amides
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Color reactions and thin-layer chromatography of amino acids: An undergraduate organic chemistry experiment for students in the allied health sciences Hurst, Michael O.; Cobb, D. Keith Students identify unknowns by determining Rf's and applying color reagents to the chromatograms. Hurst, Michael O.; Cobb, D. Keith J. Chem. Educ. 1990, 67, 978.
Thin Layer Chromatography |
Amino Acids |
Qualitative Analysis
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Amino acid chromatography: The "best" technique for student labs Helser, Terry L. Comparisons of linear, conical, and circular chromatograms, as well as media and elutants. Helser, Terry L. J. Chem. Educ. 1990, 67, 964.
Amino Acids |
Chromatography |
Separation Science
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Qualitative amino acid analysis of small peptides by GC/MS Mabbott, Gary A. Besides being appealing to students the exercise described here gives them experiences in derivation methods that are often necessary in order to make nonvolatile samples amenable to gas chromatography separation. Mabbott, Gary A. J. Chem. Educ. 1990, 67, 441.
Amino Acids |
Qualitative Analysis |
Gas Chromatography |
Mass Spectrometry |
Instrumental Methods
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Oxidation of cysteine to cystine using hydrogen peroxide Hill, John W.; Coy, Robert B.; Lewandowski, Peter E. This synthesis has several advantages as an undergraduate laboratory exercise. Hill, John W.; Coy, Robert B.; Lewandowski, Peter E. J. Chem. Educ. 1990, 67, 172.
Amino Acids |
Oxidation / Reduction
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Synthesis of an enkephalinase inhibitor, Gly-Gly-Phe-Leu, by continuous-flow peptide synthesizer Iskander, Magdy N.; Jones, Paul A. The assembly of the continuous flow peptide synthesizer was carried out in the author's laboratory with no difficulty and has generated great interest among their students. Iskander, Magdy N.; Jones, Paul A. J. Chem. Educ. 1990, 67, 170.
Synthesis |
Proteins / Peptides |
Medicinal Chemistry |
Laboratory Equipment / Apparatus
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A game show approach to teaching peptide sequencing Lemley, Paul V. The game allows each group of students to propose experiments, report what results would have occurred, interpret results, and propose more experiments. Lemley, Paul V. J. Chem. Educ. 1989, 66, 1011.
Proteins / Peptides
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Microscale synthesis and analysis of a dipeptide Blatchly, Richard A.; Allen, Timothy R.; Bergstrom, Dirk T.; Shinozaki, Yuji The synthesis of a dipeptide from its component amino acids and its analysis by chiral-phase thin-layer chromatography. Blatchly, Richard A.; Allen, Timothy R.; Bergstrom, Dirk T.; Shinozaki, Yuji J. Chem. Educ. 1989, 66, 965.
Microscale Lab |
Synthesis |
Proteins / Peptides |
Thin Layer Chromatography |
Amino Acids
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Azosulfonamides: Preparation and binding to carbonic anhydrase: A bioorganic chemistry experiment Manalang, Mary G.; Bundy, Hallie F. Preparation of azosulfonamide, visible absorption analysis of free and enzyme-bond azosulfonamide, and titration of BCA with azosulfonamide. Manalang, Mary G.; Bundy, Hallie F. J. Chem. Educ. 1989, 66, 609.
Bioorganic Chemistry |
Synthesis |
Proteins / Peptides |
Titration / Volumetric Analysis |
Enzymes
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Lecture demonstrations for organic/ biochemistry allied health courses Deavor, James P. Simple demonstrations on enantiomeric pairs and protein structure. Deavor, James P. J. Chem. Educ. 1988, 65, 622.
Enantiomers |
Chirality / Optical Activity |
Proteins / Peptides |
Nonmajor Courses |
Amino Acids
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Analysis of aspartame and its hydrolysis products by thin-layer chromatography Conklin, Alfred R. Separating and identifying the amino acids found in aspartame. Conklin, Alfred R. J. Chem. Educ. 1987, 64, 1065.
Thin Layer Chromatography |
Amino Acids |
Food Science |
Separation Science |
Qualitative Analysis
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A convenient synthesis of aspartame Lindeberg, Gunnar The one tube, enzymatic synthesis of the dipeptide sweetener aspartame. Lindeberg, Gunnar J. Chem. Educ. 1987, 64, 1062.
Synthesis |
Enzymes |
Proteins / Peptides
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A project lab for an advanced general chemistry course featuring the amino acid, glycine Dudek, Emily P. Synthesis of glycine, measurement of its nitrogen content by eudiometry, and the estimation of its Rf value as compared to other amino acids using paper chromatography. Dudek, Emily P. J. Chem. Educ. 1987, 64, 899.
Amino Acids |
Synthesis
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Protein structure prediction in color Davis, Lawrence C.; Radke, Gary A. 84. Implementing the Chuo and Faslar method for prediction of secondary structure and the Kyte and Doolittle method for predicting "hydropathic character" on an Apple IIe computer with color graphics. Davis, Lawrence C.; Radke, Gary A. J. Chem. Educ. 1987, 64, 582.
Proteins / Peptides |
Molecular Properties / Structure
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The enzymatic resolution of aromatic amino acids Sheardy, Riehard; Liotta, L.; Steinhart, E.; Champion, R.; Rinker, J.; Planutis, M.; Salinkas, J.; Boyer, T.; Carcanague, D. This article presents an experiment that can demonstrate as many principles of steroisomersim as possible and is also efficient in terms of time and preparation. Sheardy, Riehard; Liotta, L.; Steinhart, E.; Champion, R.; Rinker, J.; Planutis, M.; Salinkas, J.; Boyer, T.; Carcanague, D. J. Chem. Educ. 1986, 63, 646.
Stereochemistry |
Chirality / Optical Activity |
Enantiomers |
Aromatic Compounds |
Amino Acids |
Enzymes
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An inexpensive molecular model Brickley, Meredith; Silva, R. A. An inexpensive, space-filling model to help students understand the structure of proteins. Brickley, Meredith; Silva, R. A. J. Chem. Educ. 1985, 62, 1077.
Molecular Modeling |
Proteins / Peptides
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The catalytic function of enzymes Splittgerber, Allan G. Review of the structure, function, and factors that influence the action of enzymes. Splittgerber, Allan G. J. Chem. Educ. 1985, 62, 1008.
Catalysis |
Enzymes |
Mechanisms of Reactions |
Proteins / Peptides |
Molecular Properties / Structure
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Zinc enzymes Bertini, I.; Luchinat, C.; Monnanni, R. The role played by catalytic and noncatalytic zinc in biochemical systems. From the "State of the Art Symposium: Bioinorganic Chemistry", held at the ACS meeting, Miami, 1985. Bertini, I.; Luchinat, C.; Monnanni, R. J. Chem. Educ. 1985, 62, 924.
Enzymes |
Bioinorganic Chemistry |
Lewis Acids / Bases |
Proteins / Peptides
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Bomb calorimetry: The energy content of pizza Stout, Roland P.; Nettleton, Faith E.; Price, Lynn M. Determining the energy content and percent protein of pizza using bomb calorimetry. Stout, Roland P.; Nettleton, Faith E.; Price, Lynn M. J. Chem. Educ. 1985, 62, 438.
Calorimetry / Thermochemistry |
Food Science |
Proteins / Peptides |
Titration / Volumetric Analysis
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Methemoglobinemia: An illness caused by the ferric state Senozan, N. M. Hemoglobin's ability to carry oxygen depends on the iron being in the +2 state; methemoglobinemia involves the oxidation of hemoglobin iron to the +3 state. Senozan, N. M. J. Chem. Educ. 1985, 62, 181.
Proteins / Peptides |
Enzymes |
Medicinal Chemistry |
Oxidation / Reduction |
Oxidation State
|
Perspectives in biochemistry: Methods for DNA sequencing Wood, Anne T. Describes how DNA is sequenced. Wood, Anne T. J. Chem. Educ. 1984, 61, 886.
Proteins / Peptides |
Biotechnology |
Electrophoresis
|
An experiment on isomerism in metal-amino acid complexes: Preparation and characterization of cobalt(III) complexes containing N-bonded monodentate, O-bonded monodentate and N,O-chelated glycine ligands Harrison, R. Graeme; Nolan, Kevin B. Synthesis of three cobalt(III) complexes that illustrate three possible modes of bonding of glycine to a metal ion, as well as methods for distinguishing among the products. Harrison, R. Graeme; Nolan, Kevin B. J. Chem. Educ. 1982, 59, 1054.
Stereochemistry |
Amino Acids |
Coordination Compounds |
Synthesis |
Diastereomers |
IR Spectroscopy |
Crystal Field / Ligand Field Theory
|
The synthesis of a dipeptide from its component amino acids: Protecting groups in the elementary organic laboratory Young, Paul E.; Campbell, Andrew A three-step procedure for synthesizing a dipeptide from its component amino acids. Young, Paul E.; Campbell, Andrew J. Chem. Educ. 1982, 59, 701.
Synthesis |
Amino Acids |
Proteins / Peptides
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Protein denaturation: A physical chemistry project lab Pickering, Miles; Crabtree, Robert H. This experiment links physical chemistry with biology and can be done with in advanced freshman course. Pickering, Miles; Crabtree, Robert H. J. Chem. Educ. 1981, 58, 513.
Proteins / Peptides |
Biophysical Chemistry |
Molecular Properties / Structure
|
Isoenzymes Daugherty, N. A. The separation, identification, and measurement of isoenzymes is an appropriate topic for a special lecture in general chemistry. Daugherty, N. A. J. Chem. Educ. 1979, 56, 442.
Enzymes |
Proteins / Peptides |
pH |
Electrophoresis |
Separation Science |
Electrochemistry |
Applications of Chemistry
|
The separation of chymotrypsin and chymotrypsinogen: An affinity chromatography experiment for biological chemistry students Branchini, Bruce; Ziolkowski, Rodney An experiment that can be used as either a demonstration or a laboratory illustrating the principles of affinity chromatography to purify an enzyme. Branchini, Bruce; Ziolkowski, Rodney J. Chem. Educ. 1979, 56, 281.
Separation Science |
Chromatography |
Proteins / Peptides
|
Amino acid sequence diversity in proteins Blackman, David The number of unique proteins that can be generated from a small number of amino acids is truly enormous. Blackman, David J. Chem. Educ. 1977, 54, 170.
Proteins / Peptides |
Amino Acids
|
Photooxidation of methionine. An integrated organic-analytical-biochemistry laboratory experiment Lewis, Catherine; Scouten, William H. The experiments presented here familiarize the student with the organic reactions necessary to prepare the starting material; introduces the use of glass beads for immobilizing a catalyst; demonstrates the use of light and methylene blue as oxidizers; requires the implementation of an important analytical technique, thin layer chromatography; provides the student with a good example of the reactivity of one amino acid, methionine. Lewis, Catherine; Scouten, William H. J. Chem. Educ. 1976, 53, 395.
Thin Layer Chromatography |
Amino Acids |
Laboratory Equipment / Apparatus |
Catalysis
|
Imidazole - Versatile today, prominent tomorrow Matuszak, C. A.; Matuszak, A. J. Imidazole chemistry has pedagogical utility for all the organic chemistry students pursing careers in the life sciences. Matuszak, C. A.; Matuszak, A. J. J. Chem. Educ. 1976, 53, 280.
Grignard Reagents |
Aromatic Compounds |
Heterocycles |
Phenols |
Acids / Bases |
Catalysis |
Coordination Compounds |
Hydrogen Bonding
|
Non-covalent interactions: Key to biological flexibility and specificity Frieden, Earl Summarizes the types of non-covalent interactions found among biomolecules and how they facilitate the function of antibodies, hormones, and hemoglobin. Frieden, Earl J. Chem. Educ. 1975, 52, 754.
Noncovalent Interactions |
Hydrogen Bonding |
Water / Water Chemistry |
Proteins / Peptides |
Amino Acids |
Molecular Properties / Structure |
Hormones
|
A space-filling model of the active site region of carboxypeptidase A Sebastian, John F.; Butkus, John C. A three-dimensional CPK space-filling model of the active site of carboxypeptidase A. Sebastian, John F.; Butkus, John C. J. Chem. Educ. 1975, 52, 660.
Molecular Properties / Structure |
Molecular Modeling |
Enzymes |
Amino Acids
|
Allied health chemistry laboratory. Amino acids, insulin, proteins, and skin Dever, David F. Describes an allied health chemistry laboratory involving amino acids, insulin, proteins and skin that begins with the construction of molecular models of amino acids and proteins. Dever, David F. J. Chem. Educ. 1975, 52, 338.
Amino Acids |
Proteins / Peptides |
Medicinal Chemistry |
Nonmajor Courses |
Molecular Properties / Structure |
Molecular Modeling |
Applications of Chemistry
|
Questions [and] Answers Campbell, J. A. 184-187. Four chemistry questions and their answers. Campbell, J. A. J. Chem. Educ. 1975, 52, 327.
Enrichment / Review Materials |
Metabolism |
Gases |
Amino Acids
|
A new chemistry program for nursing and allied health students Stanitski, Conrad L.; Sears, Curtis T., Jr. Outlines and discusses the topics considered in a chemistry program for nursing and allied health students. Stanitski, Conrad L.; Sears, Curtis T., Jr. J. Chem. Educ. 1975, 52, 226.
Nonmajor Courses |
Applications of Chemistry |
Medicinal Chemistry |
Oxidation / Reduction |
Catalysis |
Acids / Bases |
pH |
Metabolism |
Drugs / Pharmaceuticals
|
A simple application device for paper chromatography and electrophoresis Barbeau, Donald L. The application holder presented eliminates the awkwardness of handling filter paper strips while applying either large quantities of unknown samples or smaller quantities of amino acid standards. Barbeau, Donald L. J. Chem. Educ. 1973, 50, 391.
Laboratory Equipment / Apparatus |
Laboratory Management |
Chromatography |
Electrophoresis |
Separation Science |
Amino Acids
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Derivatives of oxo acids. IUPAC Publications on Nomenclature. Other International Reports. SI Units Fernelius, W. C.; Loening, Kurt; Adams, Roy M. Summarizes the nomenclature of oxo acid derivatives. Fernelius, W. C.; Loening, Kurt; Adams, Roy M. J. Chem. Educ. 1973, 50, 341.
Nomenclature / Units / Symbols |
Acids / Bases
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Photochemical reactions of natural macromolecules. Photoreactions of proteins Neckers, Douglas C. Reviews salient features of protein destruction by ultraviolet radiation. Neckers, Douglas C. J. Chem. Educ. 1973, 50, 164.
Photochemistry |
Proteins / Peptides |
Amino Acids
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Quick paper chromatography of amino acids Heimer, E. P. Applies acetonitrile-buffer systems for the relatively rapid separation of amino acids. Heimer, E. P. J. Chem. Educ. 1972, 49, 547.
Chromatography |
Separation Science |
Amino Acids
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A unified apparatus for paper and gel electrophoresis Racusen, David; White, Lee Presents an apparatus that can be used for either paper and gel electrophoresis. Racusen, David; White, Lee J. Chem. Educ. 1972, 49, 439.
Electrophoresis |
Separation Science |
Amino Acids |
Proteins / Peptides
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Questions [and] Answers Campbell, J. A. Five questions requiring an application of basic chemical principles. Campbell, J. A. J. Chem. Educ. 1972, 49, 269.
Enrichment / Review Materials |
Agricultural Chemistry |
Metabolism |
Calorimetry / Thermochemistry |
Proteins / Peptides
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Sickle-cell anemia, hemoglobin solubility and resistance to malaria Martin, David L.; Huheey, James E. The phenomenon of erythrocytic sickling is of considerable pedagogical usefulness since it provides a bridge of relevance between chemistry and biology. Martin, David L.; Huheey, James E. J. Chem. Educ. 1972, 49, 177.
Proteins / Peptides |
Medicinal Chemistry |
Applications of Chemistry
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Separation of leucine and isoleucine by thin-layer chromatography Gatto, Karen L.; Borders, C. L., Jr. This experiment involves the separation of leucine and isoleucine through continuous ascending thin layer chromatography. Gatto, Karen L.; Borders, C. L., Jr. J. Chem. Educ. 1970, 47, 840.
Separation Science |
Thin Layer Chromatography |
Chromatography |
Amino Acids |
Constitutional Isomers
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Models for tertiary structures: Myoglobin and lysozyme Smith, Ivor; Smith, Margaret J.; Roberts, Lynne Presents the design details for constructing three dimensional models of proteins, including myoglobin and lysozyme. Smith, Ivor; Smith, Margaret J.; Roberts, Lynne J. Chem. Educ. 1970, 47, 302.
Molecular Properties / Structure |
Molecular Modeling |
Proteins / Peptides |
Hydrogen Bonding |
Noncovalent Interactions
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A short, intensive experiment in paper chromatography McCullough, Thomas; Lechtenberg, Andre A paper chromatographic system capable of separating a challenging mixture of components (amino acids) in less than three hours. McCullough, Thomas; Lechtenberg, Andre J. Chem. Educ. 1970, 47, 141.
Chromatography |
Separation Science |
Amino Acids
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The resolution of DL-histidine: An organic chemistry experiment using an ion exchange resin Bosch, Arthur J. This experiment involves the isolation of the amino acid, D-histidine, from DL-histidine, and gives a product with high optical purity while demonstrating the use of an ion exchange resin and mixed solvent recrystallization. Bosch, Arthur J. J. Chem. Educ. 1969, 46, 691.
Ion Exchange |
Amino Acids |
Chirality / Optical Activity |
Enantiomers
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Errors in representing structures of proteins and nucleic acids Day, Richard A.; Ritter, Edmond J. It is the exceptional modern textbook in biochemistry or organic chemistry that consistently represents the structures of proteins and nucleic acids as they are found to exist in nature. Day, Richard A.; Ritter, Edmond J. J. Chem. Educ. 1967, 44, 761.
Proteins / Peptides |
Molecular Properties / Structure
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Systematic names for the tartaric acids Baxter, J. N. Examines the use of the small capital letters D and L in naming tartaric acids. Baxter, J. N. J. Chem. Educ. 1964, 41, 619.
Nomenclature / Units / Symbols |
Acids / Bases |
Carbohydrates |
Chirality / Optical Activity |
Enantiomers
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Models illustrating the helix-coil transition in polypeptides Hayman, H. J. G. Describes modifications of the Fisher-Hirschfelder-Taylor atom models whereby a model of a polypeptide molecule in the form of a random chain can easily be rolled up to give the alpha-helix configuration and then unrolled again to give once more a random chain. Hayman, H. J. G. J. Chem. Educ. 1964, 41, 561.
Molecular Modeling |
Molecular Properties / Structure |
Proteins / Peptides
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Demonstration of radioautography and paper chromatography using a Polaroid camera Towne, Jack C.; Gatti, Bonnie M. Presents a simple combined demonstration of paper chromatography and radioautography illustrating the separation of two C-14 labeled amino acids. Towne, Jack C.; Gatti, Bonnie M. J. Chem. Educ. 1963, 40, 243.
Chromatography |
Isotopes |
Separation Science |
Amino Acids
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Ribonucleic acid: The simplest information-transmitting molecule Fraenkel-Conrat, H. Examines the chemical structure of nucleic acids, chemical modification of RNA and mutagenesis, role of RNA in protein structure, the mechanism of information transfer from RNA to protein, and mutants and coding. Fraenkel-Conrat, H. J. Chem. Educ. 1963, 40, 216.
Proteins / Peptides
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Structural variety of natural products Roderick, William R. Classes of natural products examined includes alkynes; quinones; benzpyrones; small and large rings; sulfur, nitrogen, and halogen-containing compounds; and new amino acids. Roderick, William R. J. Chem. Educ. 1962, 39, 2.
Natural Products |
Amino Acids |
Alkynes |
Aromatic Compounds
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Ion exchange paper chromatography Thomas, Alan T.; Phillips, J. P. Describes an experiment/demonstration in ion exchange paper chromatography separating amino acids. Thomas, Alan T.; Phillips, J. P. J. Chem. Educ. 1961, 38, 406.
Qualitative Analysis |
Ion Exchange |
Chromatography |
Separation Science |
Amino Acids
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Identification of amino acids in a protein hydrolysate by paper chromatography Clapp, L. B.; Hansch, Corwin By varying the number of amino acids to be identified, the difficulty of this procedure can be easily controlled. Clapp, L. B.; Hansch, Corwin J. Chem. Educ. 1960, 37, 293.
Amino Acids |
Qualitative Analysis |
Proteins / Peptides |
Chromatography
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Schematic models of biochemical polymers Blackwell, R. Quentin Demonstrates the use of plastic necklace beads to represent polysaccharides, peptides and proteins, and nucleotides. Blackwell, R. Quentin J. Chem. Educ. 1957, 34, 500.
Molecular Modeling |
Molecular Properties / Structure |
Proteins / Peptides |
Carbohydrates
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Assignment of D and L prefixes to the tartaric acids: The Wohl conventions Abernethy, John Leo Examines the Wohl system for designating dextro- and levorotatory tartaric acids. Abernethy, John Leo J. Chem. Educ. 1957, 34, 150.
Nomenclature / Units / Symbols |
Molecular Properties / Structure |
Enantiomers |
Stereochemistry |
Chirality / Optical Activity |
Acids / Bases
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Assignment of D and L prefixes to the tartaric acids: An unsettled stereochemical question Nenitzescu, Costin D. Examines the Wohl and Freudenberg systems of designating dextro- and levorotatory tartaric acids. Nenitzescu, Costin D. J. Chem. Educ. 1957, 34, 147.
Molecular Properties / Structure |
Nomenclature / Units / Symbols |
Acids / Bases |
Stereochemistry |
Enantiomers |
Chirality / Optical Activity
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Amphoteric molecules, ions and salts Davidson, David It is the aim of this paper to call attention to the splendid opportunity amphoteric substances afford for the teaching of acid-base principles. Davidson, David J. Chem. Educ. 1955, 32, 550.
Molecular Properties / Structure |
Acids / Bases |
pH |
Aqueous Solution Chemistry
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Multiple chromatograms for detection of amino acids in blood serum Ven Horst, Sister Helene; Carstens, Yolanda A simple piece of equipment was constructed whereby 2 to 16 chromatograms could be run simultaneously and under identical conditions. Ven Horst, Sister Helene; Carstens, Yolanda J. Chem. Educ. 1954, 31, 576.
Chromatography |
Amino Acids |
Qualitative Analysis |
Laboratory Equipment / Apparatus
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Potentialities of protein isomerism Asimov, Isaac The permutations generated by structural isomerism in proteins could be demonstrated more convincingly and realistically if the amino acid compositions of actual proteins were taken into consideration. Asimov, Isaac J. Chem. Educ. 1954, 31, 125.
Proteins / Peptides |
Molecular Properties / Structure |
Amino Acids |
Constitutional Isomers
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pH approximations McBay, Arthur J. Describes the use of data from tables to approximate pH values. McBay, Arthur J. J. Chem. Educ. 1952, 29, 526.
pH |
Acids / Bases |
Aqueous Solution Chemistry
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A scheme for the qualitative identification of amino acids Dunn, Max S.; Drell, William This scheme of analysis has been used to successfully identify seventeen of the naturally occurring amino acids distributed in mixtures containing from two to five components. Dunn, Max S.; Drell, William J. Chem. Educ. 1951, 28, 480.
Qualitative Analysis |
Amino Acids
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Teaching amino acid formulation Patton, A. R. Presents a device that aids in explaining the concept of dipolar ions necessary to an understanding of the behavior of amino acids and proteins. Patton, A. R. J. Chem. Educ. 1951, 28, 471.
Amino Acids |
Proteins / Peptides |
Acids / Bases |
pH
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