TIGER

Journal Articles: 27 results
Biochemical View: A Web Site Providing Material for Teaching Biochemistry Using Multiple Approaches  Fernanda C. Dórea, Higor S. Rodrigues, Oscar M. M. Lapouble, Márcio R. Pereira, Mariana S. Castro, and Wagner Fontes
Biochemical View is a free, full access Web site whose main goals are to complement existing biochemistry instruction and materials, provide material to teachers preparing conventional and online courses, and popularize the use of these resources in undergraduate courses.
Dórea, Fernanda C.; Rodrigues, Higor S.; Lapouble, Oscar M. M.; Pereira, Márcio R.; Castro, Mariana S.; Fontes, Wagner. J. Chem. Educ. 2007, 84, 1866.
Amino Acids |
Bioenergetics |
Carbohydrates |
Enzymes |
Glycolysis |
Lipids |
Metabolism |
Fatty Acids
A New Colorimetric Assay of Tabletop Sweeteners Using a Modified Biuret Reagent  Christopher J. Fenk, Nathan Kaufman, and Donald G. Gerbig, Jr.
Presents a new, fast and effective colorimetric analysis of aspartame that incorporates a less caustic biuret reagent and visible spectroscopic analysis for selective detection in aqueous solutions using readily available instrumentation.
Fenk, Christopher J.; Kaufman, Nathan; Gerbig, Donald G., Jr. J. Chem. Educ. 2007, 84, 1676.
Consumer Chemistry |
Coordination Compounds |
Crystal Field / Ligand Field Theory |
Food Science |
Qualitative Analysis |
Quantitative Analysis |
UV-Vis Spectroscopy |
Amino Acids
Amino Acids  William F. Coleman
The Featured Molecules this month are the 20 standard alpha-amino acids found in proteins. The molecules are presented in two formats, the neutral form and the ionized form found in solution at physiologic pH.
Coleman, William F. J. Chem. Educ. 2006, 83, 1103.
Amino Acids |
Proteins / Peptides |
Molecular Properties / Structure |
Molecular Modeling |
Molecular Mechanics / Dynamics
Glycosyltransferases A and B: Four Critical Amino Acids Determine Blood Type  Natisha L. Rose, Monica M. Palcic, and Stephen V. Evans
Human A, B, and O blood type is determined by the presence or absence of distinct carbohydrate structures on red blood cells. In this review the chemistry of the blood group ABO system and the role of glycosyltransferase A, glycosyltransferase B, and the four amino acids critical to determining blood group status are discussed.
Rose, Natisha L.; Palcic, Monica M.; Evans, Stephen V. J. Chem. Educ. 2005, 82, 1846.
Carbohydrates |
Enzymes |
Kinetics |
Bioorganic Chemistry |
Crystals / Crystallography |
Molecular Biology |
X-ray Crystallography |
Amino Acids
Cotton Effect in Copper–Proline Complexes in the Visible Region  Victor Volkov and Rolf Pfister
This article suggests taking advantage of the visible dd electronic transition of Cu2+, which allows one to contrast the normal optical rotatory dispersion response of d- and l-proline in aqueous solution with the strong Cotton effect observed when these amino acids are complexed with a metal cation.
Volkov, Victor; Pfister, Rolf. J. Chem. Educ. 2005, 82, 1663.
Chirality / Optical Activity |
IR Spectroscopy |
Molecular Properties / Structure |
Spectroscopy |
Stereochemistry |
UV-Vis Spectroscopy |
Amino Acids |
Coordination Compounds |
Crystal Field / Ligand Field Theory
Chemical Modification of Papain and Subtilisin: An Active Site Comparison. An Undergraduate Biochemistry Experiment   Mireille St-Vincent and Michael Dickman
This experiment demonstrates the specific chemistry of cysteine and serine residues in the active sites of papain and subtilisin.
St-Vincent, Mireille; Dickman, Michael. J. Chem. Educ. 2004, 81, 1048.
Amino Acids |
Bioorganic Chemistry |
Enzymes
The Monosodium Glutamate Story: The Commercial Production of MSG and Other Amino Acids  Addison Ault
Examples of the industrial synthesis of pure amino acids are presented. The emphasis is on the synthesis of (S)-glutamic acid and, to a lesser extent, (S)-lysine and (R,S)-methionine. These amino acids account for about 90% of the total world production of amino acids.
Ault, Addison. J. Chem. Educ. 2004, 81, 347.
Amino Acids |
Biotechnology |
Chirality / Optical Activity |
Consumer Chemistry |
Enzymes |
Natural Products |
Stereochemistry |
Synthesis |
Food Science
Protein Design Using Unnatural Amino Acids  Basar Bilgiçer and Krishna Kumar
Using examples from the literature, this article describes the available methods for unnatural amino acid incorporation and highlights some recent applications including the design of hyperstable protein folds.
Bilgiçer, Basar; Kumar, Krishna. J. Chem. Educ. 2003, 80, 1275.
Amino Acids |
Bioorganic Chemistry |
Biotechnology |
Proteins / Peptides |
Synthesis |
Molecular Properties / Structure
Nucleophilic and Enzymic Catalysis of p-Nitrophenylacetate Hydrolysis  Head, Michael B.; Mistry, Kalpna S.; Ridings, Bernard J.; Smith, Christopher A.; Parker, Mark J.
Experimental procedure for determining the relative effectiveness of several amino acids and enzymes in catalyzing the hydrolysis of p-nitrophenylacetate; sample data and analysis included.
Head, Michael B.; Mistry, Kalpna S.; Ridings, Bernard J.; Smith, Christopher A.; Parker, Mark J. J. Chem. Educ. 1995, 72, 184.
Amino Acids |
Enzymes |
Proteins / Peptides |
Catalysis
Identification of amino acids in unknown dipeptides: A derivatization with 9-fluorenylmethyl chloroformate and HPLC   Clapp, Charles H.; Swan, James S.; Poechmann, James L.
This paper describes a biochemistry experiment in which students use HPLC to identify the amino acids in unknown dipeptides.
Clapp, Charles H.; Swan, James S.; Poechmann, James L. J. Chem. Educ. 1992, 69, A122.
Amino Acids |
Proteins / Peptides |
HPLC
Inclass interactive worksheets for organic chemistry  Ostercamp, Daryl L.
The author has designed two in-class worksheets for use near the end of a two semester organic chemistry course, one dealing with mono- and disaccharides and the second dealing with alpha-amino acids and dipeptides.
Ostercamp, Daryl L. J. Chem. Educ. 1992, 69, 318.
Carbohydrates |
Amino Acids |
Proteins / Peptides
Microscale synthesis and analysis of a dipeptide  Blatchly, Richard A.; Allen, Timothy R.; Bergstrom, Dirk T.; Shinozaki, Yuji
The synthesis of a dipeptide from its component amino acids and its analysis by chiral-phase thin-layer chromatography.
Blatchly, Richard A.; Allen, Timothy R.; Bergstrom, Dirk T.; Shinozaki, Yuji J. Chem. Educ. 1989, 66, 965.
Microscale Lab |
Synthesis |
Proteins / Peptides |
Thin Layer Chromatography |
Amino Acids
Lecture demonstrations for organic/ biochemistry allied health courses  Deavor, James P.
Simple demonstrations on enantiomeric pairs and protein structure.
Deavor, James P. J. Chem. Educ. 1988, 65, 622.
Enantiomers |
Chirality / Optical Activity |
Proteins / Peptides |
Nonmajor Courses |
Amino Acids
Analysis of aspartame and its hydrolysis products by thin-layer chromatography  Conklin, Alfred R.
Separating and identifying the amino acids found in aspartame.
Conklin, Alfred R. J. Chem. Educ. 1987, 64, 1065.
Thin Layer Chromatography |
Amino Acids |
Food Science |
Separation Science |
Qualitative Analysis
The synthesis of a dipeptide from its component amino acids: Protecting groups in the elementary organic laboratory  Young, Paul E.; Campbell, Andrew
A three-step procedure for synthesizing a dipeptide from its component amino acids.
Young, Paul E.; Campbell, Andrew J. Chem. Educ. 1982, 59, 701.
Synthesis |
Amino Acids |
Proteins / Peptides
Amino acid sequence diversity in proteins  Blackman, David
The number of unique proteins that can be generated from a small number of amino acids is truly enormous.
Blackman, David J. Chem. Educ. 1977, 54, 170.
Proteins / Peptides |
Amino Acids
Photooxidation of methionine. An integrated organic-analytical-biochemistry laboratory experiment  Lewis, Catherine; Scouten, William H.
The experiments presented here familiarize the student with the organic reactions necessary to prepare the starting material; introduces the use of glass beads for immobilizing a catalyst; demonstrates the use of light and methylene blue as oxidizers; requires the implementation of an important analytical technique, thin layer chromatography; provides the student with a good example of the reactivity of one amino acid, methionine.
Lewis, Catherine; Scouten, William H. J. Chem. Educ. 1976, 53, 395.
Thin Layer Chromatography |
Amino Acids |
Laboratory Equipment / Apparatus |
Catalysis
Non-covalent interactions: Key to biological flexibility and specificity  Frieden, Earl
Summarizes the types of non-covalent interactions found among biomolecules and how they facilitate the function of antibodies, hormones, and hemoglobin.
Frieden, Earl J. Chem. Educ. 1975, 52, 754.
Noncovalent Interactions |
Hydrogen Bonding |
Water / Water Chemistry |
Proteins / Peptides |
Amino Acids |
Molecular Properties / Structure |
Hormones
A space-filling model of the active site region of carboxypeptidase A  Sebastian, John F.; Butkus, John C.
A three-dimensional CPK space-filling model of the active site of carboxypeptidase A.
Sebastian, John F.; Butkus, John C. J. Chem. Educ. 1975, 52, 660.
Molecular Properties / Structure |
Molecular Modeling |
Enzymes |
Amino Acids
Allied health chemistry laboratory. Amino acids, insulin, proteins, and skin  Dever, David F.
Describes an allied health chemistry laboratory involving amino acids, insulin, proteins and skin that begins with the construction of molecular models of amino acids and proteins.
Dever, David F. J. Chem. Educ. 1975, 52, 338.
Amino Acids |
Proteins / Peptides |
Medicinal Chemistry |
Nonmajor Courses |
Molecular Properties / Structure |
Molecular Modeling |
Applications of Chemistry
Questions [and] Answers  Campbell, J. A.
184-187. Four chemistry questions and their answers.
Campbell, J. A. J. Chem. Educ. 1975, 52, 327.
Enrichment / Review Materials |
Metabolism |
Gases |
Amino Acids
Photochemical reactions of natural macromolecules. Photoreactions of proteins  Neckers, Douglas C.
Reviews salient features of protein destruction by ultraviolet radiation.
Neckers, Douglas C. J. Chem. Educ. 1973, 50, 164.
Photochemistry |
Proteins / Peptides |
Amino Acids
A unified apparatus for paper and gel electrophoresis  Racusen, David; White, Lee
Presents an apparatus that can be used for either paper and gel electrophoresis.
Racusen, David; White, Lee J. Chem. Educ. 1972, 49, 439.
Electrophoresis |
Separation Science |
Amino Acids |
Proteins / Peptides
Structural variety of natural products  Roderick, William R.
Classes of natural products examined includes alkynes; quinones; benzpyrones; small and large rings; sulfur, nitrogen, and halogen-containing compounds; and new amino acids.
Roderick, William R. J. Chem. Educ. 1962, 39, 2.
Natural Products |
Amino Acids |
Alkynes |
Aromatic Compounds
Identification of amino acids in a protein hydrolysate by paper chromatography  Clapp, L. B.; Hansch, Corwin
By varying the number of amino acids to be identified, the difficulty of this procedure can be easily controlled.
Clapp, L. B.; Hansch, Corwin J. Chem. Educ. 1960, 37, 293.
Amino Acids |
Qualitative Analysis |
Proteins / Peptides |
Chromatography
Potentialities of protein isomerism  Asimov, Isaac
The permutations generated by structural isomerism in proteins could be demonstrated more convincingly and realistically if the amino acid compositions of actual proteins were taken into consideration.
Asimov, Isaac J. Chem. Educ. 1954, 31, 125.
Proteins / Peptides |
Molecular Properties / Structure |
Amino Acids |
Constitutional Isomers
Teaching amino acid formulation  Patton, A. R.
Presents a device that aids in explaining the concept of dipolar ions necessary to an understanding of the behavior of amino acids and proteins.
Patton, A. R. J. Chem. Educ. 1951, 28, 471.
Amino Acids |
Proteins / Peptides |
Acids / Bases |
pH